Microsoft Entra ID for Dynamics 365: A Beginner's Guide

Entra is Microsoft’s identity management platform which helps admins control who can sign in to Dynamics 365 and what other applications or environments users can access. In this article, I’ll explain the core concepts you must know if you work with Microsoft Dynamics 365 applications.

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Microsoft Entra portal of D365 Training

What is Microsoft Entra ID

Microsoft Entra ID (formerly known as Azure Active Directory) is Microsoft’s identity and access platform which includes many services; most of which you don’t need to know unless you are a system administrator responsible for your organisation’s identity and access management. If you are taking AZ-900, Entra ID is one of the topics. See AZ-900 exam topics.

If you work with Microsoft Dynamics apps, you only need to know these services: sign-in, security and access management to cloud applications.

Entra services you must know

While some Dynamics 365 apps allow you to link permissions or privileges to Security Groups, these groups do not control what users can do once they have logged in, only whether they can log in.

How Microsoft Entra and Dynamics 365 Apps work together

Entra ID uses Security Groups to determine if a user can log into the environment or app they want to use. For Dynamics 365 CE and F&O, these are Power Platform environments, while for Business Central, the link is with Business Central environments managed via the dedicated Business Central admin centre.

Entra verifies the combination of user details including their licences, role, security groups and conditional access before granting access to the user. Any changes in Entra are typically applied in real-time.

What admins can do with Entra

Administrators can use Microsoft Entra ID to speed up user onboarding and add capabilities to Dynamics applications.

Dynamics 365 data flow and Microsoft Entra architecture

Differences between the Microsoft 365 admin center and the Microsoft Entra admin center

The Microsoft 365 admin center manages users, licences, and services across the organisation tenant. The Microsoft Entra admin center handles identity: sign-in policies, conditional access, and app registrations.

Think in these terms: Entra is the organisation directory, the place where admins create and maintain identity and access management infrastructure of the organisation. The Microsoft 365 admin center sits on top of Entra, and it’s where Microsoft 365 admins manage daily operations.

Can you have Microsoft Entra and not have Microsoft 365?

Entra can exist without Microsoft 365: For example, you can create and manage an Entra ID tenant for one organisation without any Microsoft 365 licences.

Entra can serve as the central identity hub for companies regardless of the productivity suite in use. Your organisation can maintain a SAP ERP and Google Workspace for emails and cloud storage while using Entra for access control, security, and integration orchestration with other Microsoft services.

What Dynamics 365 users and consultants must learn about Entra ID

Consultants need to know how Entra governs access to Dynamics 365. That means user provisioning, security groups, conditional access, and the app registrations behind integrations.

Most companies that implement Microsoft Dynamics 365 apps take identity management and security seriously, and often use more applications across different environments and even tenants. In this case, your knowledge of how Entra controls identity, access management, data pipelines and APIs is a skill that will help you boost your career as a user or a consultant.

Entra admin vs Dynamics 365 admin: roles and differences explained

In medium to large organisations, an Entra admin manages tenant identity: users, groups, and sign-in policies. A Dynamics 365 admin manages the application: environments, security roles, and business data.

The two admin centres serve different purposes.

Feature/Aspect Microsoft Entra ID Admin Dynamics 365 Admin
Primary function Identity, access management, directory-wide roles. Dynamics 365 applications and environments
Access Level Tenant-wide or scoped via Administrative Units Limited to Dynamics 365 instances; cannot create tenant users or assign subscriptions
Instance & App Management No Full within the assigned Dynamics 365 environment and role
Best for IT admins, identity managers, security governance Business admins, application owners, environment managers

In essence, a Microsoft Entra administrator working for a medium-size business controls identities, licences, access, and role assignments across all Microsoft 365 (and non-Microsoft) services.

A Dynamics 365 administrator focuses on managing Dynamics 365 environments, privileges and permissions, Dynamics applications and extensions, and provides operational support for Dynamics users.

Learning paths and certifications for Entra ID

On Microsoft Learn, Microsoft Entra ID sits under its own dedicated category called Microsoft Security, Compliance, and Identity (SCI), rather than under Azure.

There are five certifications for this path:

If you use Dynamics applications every day, the SC-900 is more than sufficient to enhance your skills in Microsoft security. For consultants, I recommend going for the SC-200 and possibly the SC-300 if your goal is to become a lead consultant or solution architect. For those who want a career in cybersecurity, the SC-100 is the goal.